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Bioactivity of the Endophytic Bacteria Inhabiting the Egyptian Medicinal Plant Hyoscyamus muticus

NRMJ_9_2_51-62

Research Article

Bioactivity of the Endophytic Bacteria Inhabiting the Egyptian Medicinal Plant Hyoscyamus muticus

Noura Sh. A. Hagaggi1*, Marwa E.A. Khalaf2 and Eman A. El Rady2

1Botany Department, Faculty of Science, Aswan University, Aswan 81528, Egypt; 2Chemistry Department, Faculty of Science, Aswan University, Aswan 81528, Egypt.

Abstract | Although medicinal plants provide various biochemicals for pharmaceutical applications, overharvesting may cause their extinction. Therefore, to preserve plant resources, the researchers must consider the microbial endophyte cultures as an alternative route for drug discovery. The aim of this study was to isolate and identify the endophytic bacteria from the medicinal Hyoscyamus muticus (L.) (Egyptian henbane) plant, and investigate their bioactivities. According to the sequences of their 16S rRNA genes, the isolated bacteria from root, stem, leaf, and flower were respectively identified as Bacillus pumilus, Bacillus mojavensis, Bacillus australimaris, and Psychrobacter pulmonis. The ethyl acetate extracts of all bacterial isolates were rich in phenolics, flavonoids, and hydrocarbons such as pentacosane, eicosane, hexadecane, heneicosane, pentadecane, and tetracosane. The extracts expressed an anti-inflammatory potential against the inhibition of protein denaturation by 77–95 % at 100 µg/ ml. Moreover, these extracts displayed strong antibacterial efficacy against Salmonella typhi, Staphylococcus aureus, and Klebsiella pneumoniae. Furthermore, the antioxidant activity of the extracts ranged from 47.12± 1.68 to 103.6± 3.8 µM Trolox equivalent/ μg extract, scavenging the 2,2-Diphenyl-1-picrylhydrazyl (DPPH) radicals by 43.66-90.21 %. This study highlights the potential of the endophytic bacteria associated with H. muticus as substitute producers of plant-related bioactive chemicals with anti-inflammatory, antibacterial, and antioxidant properties. To our knowledge, this is the first study concerning the endophytic bacteria from H. muticus.


Received | January 26, 2025; Revised | February 21, 2025; Accepted | March 02, 2025; Published | March 13, 2025

*Correspondence | Noura Sh. A. Hagaggi, Botany Department, Faculty of Science, Aswan University, Aswan 81528, Egypt; Email: nourasharkawi@sci.aswu.edu.eg

Citation | Hagaggi, N.S.A., M.E.A. Khalaf and E.A. El-Rady. 2025. Bioactivity of the endophytic bacteria inhabiting the Egyptian medicinal plant Hyoscyamus muticus. Novel Research in Microbiology Journal, 9(2): 51-62.

DOI | https://dx.doi.org/10.17582/journal.NRMJ/2025/9.2.51.62

Keywords | Bacteria, Bioactivity, Endophyte, Hyoscyamus muticus, Metabolites

Copyright: 2025 by the authors. Licensee ResearchersLinks Ltd, England, UK.

This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).



Introduction

Hyoscyamus muticus (L.) is a Solanaceae family medicinal shrub that grows naturally in desert areas (Täckholm, 1974), which has been used in medicine since ancient history due to its abundant phytochemicals and medicinal properties (Lekmine et al., 2025). Despite plants being potential sources for new drugs, their uses have some restrictions; as plants are found in a variety of environments, have different geographic distributions, and their chemical compositions also varied, in addition, the excessive harvesting of these plants threatens their biodiversity and places them at risk of extinction (Mishra et al., 2023). As a result, it is urgent to find new eco-friendly and sustainable sources of plant bioactive products. Endophytic bacteria that inhabit the inner tissues of plants can build a symbiotic relationship with their host plants and produce a similar array of bioactive metabolic compounds as those of their hosts (Wu et al., 2021). Endophytic bacteria are now being used more frequently as an alternative approach for producing bioactive secondary metabolites because of their self-sustainability and controllable growth conditions (Cabello, 2020). Therefore, the most highly regarded alternative for the synthesis of a variety of bioactive phytocompounds is the study of endophytes; particularly the endophytic bacteria (Drożdżyński et al., 2024).

According to previous studies, diverse endophytic bacterial members related to the genera Bacillus, Pseudomonas, Brevibacterium, Acinetobacter, and Agrobacterium were documented to produce a wide range of biologically active compounds that could be used in many industries such as food, cosmetics, pharmaceuticals, and agriculture (Strobel, 2003; Feng et al., 2022). The secondary metabolites produced by the endophytic bacteria are categorized based on their functional groups into various classes, including alkaloids, flavonoids, phenolics, saponins, tannins, chinones, steroids, and others (Kumari et al., 2023). A previous study hypothesized that as H. muticus lives in a harsh desert environment and is best known for its numerous pharmaceutical activities (Abd El-Hafeez et al., 2022); it may contain secondary metabolites-producing endophytic bacteria with significant bioactivities. Thus, the objectives of the current study were to isolate and identify the endophytic bacteria from the different parts of H. muticus, analyze the secondary metabolites existing in their extracts, and evaluate their anti-inflammatory, antibacterial, and antioxidant potentials.

Materials and Methods

Plant samples

Fresh healthy H. muticus plants were obtained from the campus of Aswan University, Egypt, and instantly transported into the bacteriology laboratory for further study.

Isolation and identification of the endophytic bacteria

Tap water was used to remove debris from plants, subjected to surface sterilization using NaOCl (5%) for 1 min., followed by ethanol (70%) for 1 min., and finally rinsed three times with sterilized distilled water (Vincent, 1970). Using a sterile scalpel, the samples were separated into parts, including roots, stems, leaves, and flowers. Each part was mashed in a sterilized solution containing 0.85% NaCl and then filtered. On plates of nutrient agar (NA), 1 ml of each filtrate was spread using a glass spreader and incubated at 37 °C for 3 d. After incubation, the developing bacterial colonies were selected based on their phenotypic differences. After preliminary screening of secondary metabolites produced by each isolate, the four most potent isolates coded as Hm-R, Hm-S, Hm-L, and Hm-F were selected for further study as representative models of root, stem, leaf, and flower-associated bacteria, respectively.

The bacterial isolates were sent to the applied biotechnology company, Ismailia, Egypt, for DNA extraction using Patho-gene-spin DNA/RNA extraction kit provided by Intron Biotechnology Company, Korea. For each bacterial isolate, the extracted DNA was checked for purity before subsequent molecular analysis. DNA samples were shipped to SolGent Company, Daejeon, South Korea for polymerase chain reaction (PCR) and 16S gene sequencing. PCR was performed using two universal primers 27F (5’-AGAGTTTGATCCTGGCTCAG-3’) and 1492R (5’- GGTTACCTTGTTACGACTT-3’) (Frank et al., 2008). A nucleotide marker of 100 base pairs was used to reconfirm the purified PCR amplicons using agarose gel (1 %). Sense and antisense directions sequences of the amplicons were performed using the 27F and 1492R primers and dideoxynucleotides (dd NTPs). The percent identity of the isolates was determined using BLAST results of the present sequences against the NCBI database. Phylogenetic analysis was performed using the neighbor-joining method in MEGA X (10.1.7) (Kumar et al., 2018).

Extraction of secondary metabolites

The secondary metabolites were extracted from the culture filtrates using ethyl acetate according to the procedure described by Seerangaraj et al. (2017). Each bacterial isolate was grown for 72 h in 5 L of nutrient broth (NB) at 37 °C and 150 rpm. The growing cultures were collected after inscubation, the cells were eliminated by centrifugation for 15 min. at 10.000 rpm and 4 oC, and the supernatants were filtered using sterile cheesecloth. The culture filtrates were thoroughly vortexed with equal volumes of ethyl acetate for 2 h. Solvent fractions were separated using a separatory funnel, evaporated at room temperature, and the extracts were stored at 4 °C for further studies.

Evaluation of the bioactivities of the bacterial extracts

Anti-inflammatory assay: The anti-inflammatory activity of the bacterial extracts against protein denaturation was evaluated in vitro using Padmanabhan and Jangle (2012) procedure. 1 ml of each extract at various concentrations (10-100 µg/ ml) was mixed with 1 ml of bovine serum albumin solution (1 %). In control tubes, 1 ml of the extract was mixed with 1 ml of dist. water. The pH of the reaction mixtures was adjusted to 6.3 and then incubated at 37 °C for 20 min. Protein denaturation was carried out by heating at 70 °C for 10 min. After that, the reaction mixtures were cooled, the optical densities (OD) were measured at 660 nm using a spectrophotometer (T60U UV-Vis, PG Instruments Ltd, England). The percent of denaturation inhibition (%) was calculated according to the following equation described by Fayez et al. (2023):

Antibacterial assay: The CLSI guidelines (2010) were followed to evaluate the antibacterial efficacy of the extracts against Salmonella typhi ATCC27870, Staphylococcus aureus ATCC25923, Escherichia coli ATCC25922, Proteus mirabilis ATCC29906, and Klebsiella pneumoniae ATCC4352, which were obtained from the bacteriology laboratory, Faculty of Science, Aswan University. Briefly, three wells (6 mm) were made aseptically in plates of inoculated Mueller-Hinton agar using a sterile cork borer. 100 µg/ ml of each extract was prepared using dimethyl sulfoxide (10 %). In each well, 50 µl of each extract was individually inoculated into each well. 50 µL of dimethyl sulfoxide (10 %) and 50 µl of chloramphenicol (100 µg/ mL) were used as negative and positive controls, respectively. After incubation at 37 oC for 24 h, the inhibition zones around the wells were measured using a calibrated ruler.

Antioxidant assay: The antioxidant activity of the extracts was determined using the DPPH assay according to the method conducted by Boly et al., (2016). Extracts were prepared at a final concentration of 100 μg/ ml in methanol-DMSO (ratio 75:25). A reaction mixture containing 100 µl fresh DPPH (0.1 %) and 100 µl of the extract were added to a 96-well plate. The reaction was carried out in darkness at room temperature for 30 min. The optical density was measured at 540 nm using a microplate reader (FLUOstar® Omega, Germany). Trolox was used as an antioxidant standard. The total antioxidant activity of each extract was expressed as µM Trolox equivalent/ μg extract using the Trolox standard curve, and the respective DPPH scavenging (%) was calculated according to the following formula reported by Baliyan et al. (2022):

Determination of chemical constituents of the endophyte’s extracts

Quantification of total phenolics: As stated by Singleton et al. (1999), the total phenolic content of each extract was spectrophotometrically assessed using the Folin-Ciocalteu reagent. The bacterial extract (1 ml) and the Folin-Ciocalteu reagent (1 ml) were added to a volumetric flask (5 ml) and left to react. Then, 7 % sodium carbonate solution (1 ml) was added; the volume was completed to 5 ml with deionized water and left in darkness. After 120 min., the absorbance was measured at 700 nm. Gallic acid was used as a reference phenolic compound. The total phenolic content of each extract was calculated using the gallic acid calibration curve as µg gallic acid equivalent per mg extract.

Quantification of total flavonoids: Based on the aluminum-flavonoid complex formation, the total flavonoid contents of the extracts were spectrophotometrically evaluated according to Chang et al. (2002). The bacterial extract (1 ml) was mixed with methanol (1 ml) and 10 % AlCl3 solution (200 μl). The reaction mixture was incubated for 3 min at room temperature, and then 200 μl of 1 M CH3COONa were added. The reaction mixture was incubated at room temperature in darkness for 40 min. The absorbance was measured at 510 nm. Quercetin was used to construct the standard curve. Per each mg of the extract, the total flavonoid content was quantified as µg quercetin equivalent.

Detection of volatile metabolites by Gas chromatography/Mass spectrometry (GC/MS) analysis

In the TR-5MS GC column (Thermo Scientific),

 

1 µl of each diluted extract in hexane (1:10) was injected. The column temperature was increased at a rate of 4.0 °C/ min. from 60 to 240 oC. Helium (1 ml/ min) was used as a carrier gas. By comparing the mass spectra and retention indices of the samples with the reference database of the NIST library, the unknown constituents in the samples were identified (Koilybayeva et al., 2023).

Statistical analysis

All experiments were repeated twice with three biological replicates. The obtained data were analyzed by one-way analysis of variance (ANOVA) at a level of P ≤ 0.05, using the Minitab (version 18.1) software. Values are the means ± standard errors (SEs).

Results

Identification of the endophytic bacteria

Based on the percentage of 16S rRNA gene sequence similarity, the present isolates Hm-R, Hm-S, Hm-L, and Hm-F were identified as Bacillus pumilus, Bacillus mojavensis, Bacillus australimaris, and Psychrobacter pulmonis, respectively, and their respective NCBI accession numbers were OP868712, OP868713, OP868714, and OP868715. The relationships between the isolates and the most closely related species from NCBI were illustrated in a neighbor-joining phylogenetic tree (Figure 1).

Anti-inflammatory activity

The statistical analysis showed that, throughout the tested concentrations of all extracts, the inhibition of protein denaturation was concentration-independent (f-ratio = 0.52347, p-value = 0.718895). The most potent isolates demonstrating ant-inflammatory potential were Hm-R and Hm-F, which inhibited the denaturation of protein by 95 ±1.52 and 90 ± 0.57 % at 100 µg/ ml, respectively (Figure 2).

Antibacterial potential

Interestingly, all the extracts exhibited inhibition against the tested pathogenic bacteria (Figure 3). The broadest spectrum of antibacterial potency of all the extracts was against S. typhi, Staphylococcus aureus, and K. pneumonia, respectively, which displayed inhibition zones diameters ranging from 22±0.57 to 31±0.14 mm in a percentage of 88 to 96.8 %, compared to the antibacterial activity of chloramphenicol as a standard antibiotic. On the other hand, the extracts exhibited moderate antibacterial activity against E. coli and P. mirabilis, with inhibition diameters ranging from 14± 1.52– 26± 0.15 mm representing 56–83.9 % compared to chloramphenicol activity.

Antioxidant activity

All extracts possessed antioxidant activity. According to their potency, the extracts were arranged in the following order: Hm-R<Hm-F<Hm-S<Hm-L as represented in Figure 4. The antioxidant activity of Hm-R, Hm-F, Hm-S, and Hm-L extracts was 103.6± 3.8, 70.29± 2.5, 54.48± 2.19, and 47.12± 1.68 µM Trolox equivalent/μg extract, respectively, which exhibited DPPH scavenging activities of 90.21 %, 66.16 %, 50.81 %, and 43.66 %, respectively.

 

 

 

 

Total phenolics and flavonoids

The total phenolic contents in the ethyl acetate extracts of Hm-R, Hm-S, Hm-L, and Hm-F were 2620± 7.07, 2103± 2.80, 1543±2.12, and 2350± 4.24 µg gallic acid equivalent/ mg extract, respectively (Figure 5). On the other hand, the extracts of Hm-R, Hm-S, Hm-L, and Hm-F contained total flavonoid quantities of 1226± 3.65, 1140± 1.41, 1005± 0.70, and 1245± 2.12 µg quercetin equivalent/ mg extract, respectively (Figure 5).

Gas chromatography/Mass spectrometry (GC/MS) analysis

Based on the mass spectra and the retention indices, the bioactive compounds in the extracts were identified as presented in Tables 1, 2, 3, and 4. In the extract of Hm-R, the most abundant compounds were Heptadecane- 2-methyl- (17.894 %), Pentacosane (13.336 %), Disulfide- di-tert-dodecyl (11.470 %), Nonane- 2,2,3-trimethyl- (11.321 %), Eicosane (10.701 %), and Tridecanol- 2-ethyl-2-methyl- (8.112 %). Among twenty-four identified compounds in Hm-S extract, the most prevalent were Octane- 2,5,6-trimethyl- (19.092 %), Butyl aldoxime- 2-methyl- anti- (18.321 %), Dibutyl phthalate

 

Table 1: Gas chromatography/Mass spectrometry (GC/MS) profile showing the major bioactive compounds in Hm-R extract.

No.

Compound name

MF

MW

RT

Area %

Peak area

Peak height

1

Nonane, 2,2,3-trimethyl-

C12H26

١٧٠

4.426

11.321

1709131

66867

٢

Formic acid, 2-methylpentyl ester

C7H14O2

١٣٠

5.213

4.379

661119

34707

٣

Octane, 5-ethyl-2-methyl-

C11H24

١٥٦

7.376

5.987

903832

69700

٤

Octadecane

C18H38

٢٥٤

7.736

5.787

873751

58814

٥

Heptadecane, 2-methyl-

C18H38

٢٥٤

9.089

17.894

2701569

145307

٦

Pentacosane

C25H52

٣٥٢

9.497

13.336

2013320

115811

٧

Disulfide, di-tert-dodecyl

C24H50S2

٤٠٢

11.378

11.470

1731725

89849

٨

Tridecanol, 2-ethyl-2-methyl-

C16H34O

٢٤٢

11.940

8.112

1224642

56867

٩

Eicosane

C20H42

٢٨٢

14.532

10.701

1615566

40634

١٠

Octane, 2-methyl-

C9H20

١٢٨

15.242

11.014

1662776

52631

 

Where: MF: Molecular formula, MW: Molecular weight, RT: Retention time

 

Table 2: Gas chromatography/Mass spectrometry (GC/MS) profile showing the major compounds in Hm-S extract.

No.

Compound name

MF

MW

RT

Area %

Peak area

Peak height

1

Nonane, 2,2,3 trimethyl-

C12H26

١٧٠

4.421

3.354

1262471

89074

٢

Heptane, 4-methylene-

C8H16

١١٢

5.208

1.662

625644

44012

٣

Ethanamine, N-pentylidene-

C7H15N

١١٣

7.374

2.767

1041370

80576

٤

Furan, tetrahydro-2,5-dimethyl-, trans-(±)-

C6H12O

١٠٠

7.734

1.910

718958

52403

٥

Dodecane

C12H26

١٧٠

9.090

9.694

3648878

224188

٦

Eicosane

C20H42

٢٨٢

9.171

1.654

622549

٤٤٩٢٠

7

Heptadecane, 8-methyl-

C18H38

٢٥٤

9.497

9.233

3475442

201959

٨

Heptadecane, 2-methyl-

C18H38

٢٥٤

9.591

2.461

926196

51620

٩

2H-Pyran-2-one, tetrahydro-3,6-dimethyl-

C7H12O2

١٢٨

9.684

1.857

699152

42812

١٠

Hexadecane

C16H34

٢٢٦

10.059

2.869

1079883

64560

١١

Chloroacetic acid, hexyl ester

C8H15ClO2

١٧٨

10.786

2.260

850776

36547

١٢

2,2-Dimethyleicosane

C22H46

٣١٠

11.203

2.273

855681

38609

١٣

Octacosane

C28H58

٣٩٤

11.379

11.024

4149590

191434

١٤

Eicosane, 9-octyl-

C28H58

٣٩٤

11.489

2.197

826775

41947

١٥

Heneicosane

C21H44

٢٩٦

11.939

8.961

3373007

144178

١٦

Hexadecane, 8-hexyl-8-pentyl-

C27H56

٣٨٠

12.060

2.098

789803

39175

١٧

Heptacosane, 1-chloro-

C27H55Cl

٤١٤

12.268

2.418

910277

36294

١٨

1-Undecene, 5-methyl-

C12H24

١٦٨

12.546

2.025

762319

36582

١٩

Didodecyl phthalate

C32H54O4

٥٠٢

13.701

2.148

808381

35205

٢٠

5-Ethyl-5-methylnonadecane

C22H46

٣١٠

14.531

7.423

2794080

107674

٢١

Cyclobutane, 1,2-diethyl-, trans-

C8H16

١١٢

14.571

4.467

1681555

76577

٢٢

Dibutyl phthalate

C16H22O4

٢٧٨

15.239

11.393

4288395

170138

٢٣

Butyl aldoxime, 2-methyl-, anti-

C5H11NO

١٠١

18.321

2.270

854523

26685

٢٤

Octane, 2,5,6-trimethyl-

C11H24

١٥٦

19.092

1.579

594154

23209

 

Where: MF: Molecular formula, MW: Molecular weight, RT: Retention time.

 

Table 3: Gas chromatography/Mass spectrometry (GC/MS) profile showing the major compounds in Hm-L extract.

No.

Compound name

MF

MW

RT

Area %

Peak area

Peak height

1

Heptane, 2,2,4,6,6-pentamethyl-

C12H26

١٧٠

4.431

17.923

1863723

88149

٢

Decane, 3,6-dimethyl-

C12H26

١٧٠

5.215

6.015

625432

39894

٣

Hexadecane, 3-methyl-

C17H36

٢٤٠

7.376

6.058

629978

48577

٤

Heptadecane, 2-methyl-

C18H38

٢٥٤

9.089

11.252

1170008

70347

٥

Decane, 3,8-dimethyl-

C12H26

١٧٠

9.496

8.025

834492

52157

٦

1,3,5,7,9-Pentaethyl-1,9-dibutoxypentasiloxane

C18H48O6Si5

٥٠٠

10.790

6.947

722371

30387

٧

Hentriacontane

C31H64

٤٣٦

11.379

9.110

947253

44039

٨

Eicosane

C20H42

٢٨٢

11.938

5.750

597876

28847

٩

Hexadecanoic acid, methyl ester

C17H34O2

٢٧٠

14.528

12.937

1345218

36211

١٠

Dibutyl phthalate

C16H22O4

٢٧٨

15.245

15.983

1661912

56329

 

Where: MF: Molecular formula, MW: Molecular weight, RT: Retention time.

 

Table 4: Gas chromatography/Mass spectrometry (GC/MS) profile showing the major compounds in Hm-F extract.

No.

Compound name

MF

MW

RT

Area %

Peak area

Peak height

1

Heptane, 2,2,4,6,6-pentamethyl-

C12H26

١٧٠

4.429

7.257

1397729

74639

٢

Decane, 3,8-dimethyl-

C12H26

١٧٠

5.214

3.043

586155

37512

٣

Octane, 2,4,6-trimethyl-

C11H24

١٥٦

7.376

4.135

796408

62495

٤

Hexacosane

C26H54

٣٦٦

7.736

2.985

574953

42100

٥

Pentadecane

C15H32

٢١٢

9.090

11.808

2274449

141610

٦

Tetracosane

C24H50

٣٣٨

9.498

10.443

2011445

112059

٧

Hexadecane

C16H34

٢٢٦

10.061

3.496

673346

40043

٨

Noradrenaline tetraTMS

C20H43NO3Si4

٤٥٧

10.788

4.212

811314

32554

٩

Eicosane

C20H42

٢٨٢

11.204

3.058

588982

29848

١٠

3,5-Dimethyldodecane

C14H30

١٩٨

11.380

10.571

2036079

106983

١١

Pentacosane

C25H52

٣٥٢

11.941

6.850

1319359

65469

١٢

Didodecyl phthalate

C32H54O4

٥٠٢

13.706

2.916

561611

25886

١٣

2-methyloctacosane

C29H60

٤٠٨

14.531

13.557

2611310

69945

١٤

Dibutyl phthalate

C16H22O4

٢٧٨

15.241

15.670

3018358

118457

 

Where: MF: Molecular formula, MW: Molecular weight, RT: Retention t.

 

(15.239 %), Cyclobutane- 1,2-diethyl- trans- (14.571 %), 5-Ethyl-5-methylnonadecane (14.531%), and Didodecyl phthalate (13.701 %). Meanwhile, Heptane- 2,2,4,6,6-pentamethyl- (17.923 %), Dibutyl phthalate (15.983 %), Hexadecanoic acid- methyl ester (12.937 %), Heptadecane- 2-methyl- (11.252 %), Hentriacontane (9.110 %) and Decane- 3,8-dimethyl- (8.025 %) represented the main components of Hm-L extract. Furthermore, fourteen compounds were found in the extract of Hm-F, among which Dibutyl phthalatehad (15.241 %), 2-methyloctacosane (14.531 %), Didodecyl phthalate (13.706 %), Pentacosane (11.941 %), 3,5-Dimethyldodecane (11.380 %), Eicosane (11.204 %), Noradrenaline tetra TMS (10.788 %), and Hexadecane (10.061 %) had the highest percentages.

Discussion

A diverse range of unique secondary metabolites were derived from living organisms, where most of these compounds were detected in the plants and their endophytes (Gouda et al., 2016). Even though bacteria occupy a significant position among these endophytes; however, their secondary metabolites have not been sufficiently studied (Singh et al., 2017). Despite this, several previous studies revealed that H. muticus-associated fungi have been explored (El-Zayat et al., 2008; Abdel-Motaal et al., 2010); however, to the best of our knowledge, no report is available for the H. muticus-associated bacteria. Consequently, the current study is the first report concerning the isolation, the identification, and the bioactivities of the bacterial endophytes inhabiting the H. muticus.

In this study, B. pumilus Hm-R, B. mojavensis Hm-S, B. australimaris Hm-L, and Psychrobacter pulmonis Hm-F were isolated from H. muticus root, stem, leaf, and flower, respectively. It has been reported that the members of the genus Bacillus were the most predominant among the medicinal plants associated with the bacterial endophytes (Ek-Ramos et al., 2019).

In the present study, the extractions were prepared from the isolated endophytic bacteria using ethyl acetate as a solvent due to its low cost, low toxicity, high extraction efficiency, and agreeable odor. The ethyl acetate extracts were investigated in vitro for their bioactivities, including anti-inflammatory, antibacterial, and antioxidant potencies.

The obtained results revealed that the anti-inflammatory activity of the extracts was strongly associated with their phenolic and flavonoid concentrations. This was in line with the results of the others, who revealed a positive association between the quantities of phenolic and flavonoid components in the extracts and their anti-inflammatory properties (Khalifa et al., 2021; Rosero et al., 2022; Gao et al., 2025). Moreover, it was observed that the extracts of Hm-R and Hm-F expressed the strongest anti-inflammatory activity, which may be attributed to their phenolic contents (Figure 5) and their eicosane and pentadecane contents (Tables 1 and 4). The high anti-inflammatory activity of eicosane and pentadecane was previously documented (Okechukwu, 2020).

It is interesting to note that all the extracts showed an antibacterial efficacy against every tested pathogenic strain (Figure 3). The antibacterial potential of the extracts may be related to their higher contents of hydrocarbons such as pentacosane, eicosane, hexadecane, heneicosane, pentadecane, and tetracosane, as revealed by GC/MS analysis (Tables 14). The antibacterial properties of hydrocarbons have previously been reported (Faleye et al., 2024). Furthermore, it was observed that the antibacterial potency of the extracts with high phenolic contents was particularly strong. This is consistent with the results of previous studies that indicated a positive relationship between the contents of phenolics in the extracts and their antibacterial properties, which may relate to the fact that phenolics can inhibit the biosynthesis of nucleic acid and the metabolic processes of the bacterial cell (Babaa and Malikb, 2014; Takó et al., 2020). Several bacterial endophytes such as B. subtilis, B. amyloliquefaciens, B. velezensis, B. altitudinis, B. licheniformis, Paenibacillus terrae, and Pseudomonas thivervalensis have been reported to possess antibacterial properties (Christina et al., 2013; Hnamte et al., 2024).

Our human bodies can produce free radicals due to internal factors such as diseases and metabolism, and external factors including irradiation, pollution, and food (Hassan et al., 2024). Overproducing these free radicals causes oxidative damage and subsequent damage to lipids, proteins, and DNA, triggering several human diseases such as cancer, diabetes, and cardiovascular disease (Yang et al., 2024). The application of external antioxidants can help to mitigate this oxidative damage. Therefore, the research for natural substances with anti-oxidative action has been more focused recently (Muhtari et al., 2024). In the current study, the total antioxidant activity of the extracts was evaluated using Trolox as a standard antioxidant. Interestingly, it was found that the extract of Hm-R exhibited the highest antioxidant and scavenging activities, followed by Hm-F, Hm-S, and Hm-L extracts. The antioxidant activity of the extracts was proportional to their phenolic contents. The positive correlation between antioxidant activity and phenolic content was recently documented (Ouamnina et al., 2024). On the other hand, the extracts displayed the ability to scavenge DPPH radicals, which may be related to their ability to donate hydrogen (Soares et al., 1997; Mahlangu et al., 2024).

Conclusions and Recommendations

In this study, the endophytic bacteria associated with the medicinal plant H. muticus were isolated and identified. Extracts from these isolates were prepared using ethyl acetate. The extracts were rich in phenolics, flavonoids, and hydrocarbons. They had significant bioactivities, including anti-inflammatory, antibacterial, and antioxidant properties, making them promising natural alternatives for the future development of drugs. We recommend exploiting these endophytic bacteria as a natural source of medicines after conducting the necessary in vivo assays on human cells to ensure safety of their application for human use.

Acknowledgments

The authors express their sincere acknowledgement and gratitude to the Botany Department, Faculty of Science, Aswan University for supporting and providing the requirements necessary for conducting this study.

Novelty Statement

This is the first report of studying the endophytic bacteria inhabiting the Egyptian medicinal plant Hyoscyamus muticus and their bioactivities.

Author’s Contribution

N.Sh.A.H: Supervision, Research design, Data analysis and writing the original draft. M.E.A.K: Methodology and Investigations. E.A.El-R: Supervision, Research design, Review and editing. All authors approved the final manuscript.

Funding

No funds, grants, or other support were received during the preparation of this study.

Ethical approval

None-applicable.

Conflict of interest

The authors have declared no conflict of interest.

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