Claudia Kohl*, Andreas Nitsche, Andreas Kurth
Email: kohlc@rki.de
...osystems. Basically, the metagenomics approach is similar to well-known shotgun-sequencing, though on a much bigger scale. For instance, the metagenome of a lake would include all the fish, ducks, plants, fungi, bacteria and everything else that belongs to the lake. If we apply this approach to clinical samples we can identify the community of etiological pathogens, without any knowledge on the targets in advance. However, clinical specimens usually comprise a...
Hadeer M. Mossa, Ausama A. Yousif, Emad A. Aboelsoud, Mahmoud El Gamal, Ahmed El-
Sanousi
Ahmed A. ElWakil1, Ausama A. Yousif2 , Adel A. Fayed3, Ibrahim M. elsabagh2, Mahmoud
El Gamal2, Omnia H. Refaei3
...>DNA polymerase mRNA and metagenomics analysis using MinIon technology.
Methods: A total of 34 adult female ticks were collected from three LSD clinically disease cattle that
were previously vaccinated using the Egyptian sheep pox (SPPV) vaccine, apparently healthy cattle in
contact with the diseased cattle, and one healthy animal located in a previously infected zone. LSDVspecific
PCR was used to detect LSDV in ...
Alif Rahman Rohim Puarada*, Safika, Agustin Indrawati
...rds of paradise, Shotgun metagenomics
...
Rawa Abdulkareem Abd
...ependent approaches like metagenomics, single-cell genomic, and metatranscriptomics which have changed the way we study microbes that are never before grown and isolated outside. Biogeochemical cycling basing on either nitrogen or carbon are put under attention here so that the effects of novel microbes on carbon fixation, organic matter decomposition, nitrogen fixation, nitrification, denitrification and ammonification are expressed. Novel microbes’ cap...
Azhar Ali1, Faheem Ahmed Khan2, Wu Di3, Huang Chunjie3, Muhammad Rizwan Yousaf1, Bilal Ahmed1, Farwa Shakeel1, Nuruliarizki Shinta Pandupuspitasari1, Windu Negara2, Bambang Waluyo Hadi Eko Prasetiyono1*
...is work employed shotgun metagenomics to examine antibiotic resistance genes (ARGs) present in the feces of dairy cattle. The presence of resistance genes in the feces indicates that certain microorganisms carry several resistance genes, which are often found in close proximity and originate from various species. Our findings indicates that the gastrointestinal system of dairy cows harbors a repertoire of 216 antimicrobial resistance genes, which are presumed ...
