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Molecular Characterization of Onion Yellow Dwarf Virus (Garlic Isolate) With Production of Virus-Free Plantlets

Molecular Characterization of Onion Yellow Dwarf Virus (Garlic Isolate) With Production of Virus-Free Plantlets

Soliman*, Ahmed M.; Mahmoud**, Sabry Y. M. and Dawood*, Rehab A.

* Virus & Phytoplasma Research Section, Plant Pathology Research Institute, Agricultural Research
Center (ARC), Giza, Egypt.
** Department of Agricultural Botany (Agricultural Microbiology), Faculty of
Agriculture, Sohag University, Sohag, Egypt

ABSTRACT

Garlic samples showing symptoms of onion yellow dwarf virus (OYDV) were obtained from previous study and tested by indirect-enzyme linked immunosorbent assay (I-ELISA), transmitted to Chenopodium amaranticolor and then confirmed by immunosorbent electron microscopy (ISEM) for the presence of OYDV. PCR primers were used to ampli$' about 1.1 Kb fragment from the viral genome using RT-PCR from infected garlic plants, such fragnent were not obtained from healthylooking plants and/or virus-free seedlings of shoot-tips. The amplified products of OYDV was cloned into pGEM@-T Easy vector, and transformed into Escherichia coli (E. coli) strain DH5a. The recombinant plasmids were obtained and sequenced. The nucleotide sequences were compared with corresponding viral nucleotide sequences reported in GenBank. The sequence analysis showed that; nucleotide sequence of OYDV-EG [Egyptian isolate (HM473189)] had 82-96% similarity compared with ten reported OYDV isolates. Thus, a method of identification and detection by RT-PCR of OYDV was established. This study also aimed to obtain OYDV-free plants from infected garlic plants using cloves subjected to electrotherapy, thermotherapy, chemotherapy or meristematic dissection followed by in vitro culture. A combination treatment with electro- and chemotherapy (15 mA/10 min + 20 mg 1-1 virazol) was found to more effective on viral elimination and survival of explants. ELISA tests showed that 85% of the plantlets that survived severe OYDV-negative.

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Journal of Virological Sciences

July

Vol. 3, Iss. 1

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