The Complete Mitochondrial Genome of Sphaeniscus atilius (Walker, 1849) (Diptera: Tephritidae) and Implication for the Phylogeny of Tephritidae
The Complete Mitochondrial Genome of Sphaeniscus atilius (Walker, 1849) (Diptera: Tephritidae) and Implication for the Phylogeny of Tephritidae
Shibao Guo1, Junhua Chen1, Nan Song2, Fangmei Zhang1*
The mitochondrial genome of S. atilius showing the protein coding genes, tRNAs, rRNAs and non-coding regions.
Usage of amino acids of 13 PCGs in the S. atilius mitogenome. (A) The total numbers of codon families; (B) Relative synonymous codon usage (RSCU) of codon families.
The nucleotide diversity (Pi) and nonsynonymous (Ka) /synonymous (Ks) substitution rate ratios of 13 PCGs of Tephritidae species.
Secondary structures of the transfer RNA genes (tRNAs) in S. atilius mitogenome.
Phylogenetic reconstruction of 39 PCGs sequences was performed using the maximum likelihood and bayesian inference methods analysis. The species sequenced in this study are indicated with red. Pachycerina (Pachycerina Decemlineata) and Sciomyza (Sciomyza simplex) were used as outgroups.
