Molecular and Epidemiological overview on Low Pathogenic Avian Influenza H9N2 in Egypt between 2015 and 2016
Amany Adel, Wesam Mady*, Zienab Mosad, Fatema Amer, Asmaa Shaaban, Dalia Said, Marwa Ali Abdel Maged, Abdel-Satar Arafa, Mohamed Kamal Morsi, Mohamed Khalifa Hassan
Reference Laboratory for Veterinary Quality Control on Poultry Production, Animal Health Research Institute, Giza 12618, Egypt.
[email protected]
Figure 1
Time distribution of the positive cases during 2015-2016
Figure 2
The prevelence of H9N2 occurrence in Egypt.
Figure 3
Geographical distribution of H9N2 in Egypt.
Figure 4
Positive % of H9N2 cases in different breeding sectors and poultry species during 2015-2016.
Figure 5
Phylogenetic tree of HA gene of LPAI H9N2, Egyptian viruses were labeled with the black dots as the target sequences of this study. The phylogenetic analysis was applied by MEGA 6 software, using Neighbor Joining method with bootstrap of 1000 replicates.
Figure 6
Phylogenetic tree of NA gene of LPAI H9N2, 5 Egyptian viruses were labeled with the colored circles as the target sequences of this study. The phylogenetic analysis was applied by MEGA 6 software, using Neighbor Joining method with bootstrap of 1000 replicates.