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Intra-Host Bayesian Phylogeography Linking Viral Evolution and Pathogenesis Comes to an Age

Brittany D. Rife ^1,2, Marco Salemi ^1,2*

^{E-mail | salemi@pathology.ufl.edu}

Complete Mitochondrial Genome of Three Fish Species (Perciformes: Amblyopinae): Genome Description and Phylogenetic Relationships

Zisha Liu¹, Na Song¹, Takashi Yanagimoto², Zhiqiang Han³, Bonian Shui³and Tianxiang Gao³*

Distribution, Abundance and Population Ecology of Ashtoret lunaris (Forskel, 1775) and Matuta planipes Fabricius, 1798 from the Sonmiani Bay (Lagoon), Pakistan

Noor Us Saher¹, Zunaira Amanat², M. Asif Gondal³ and Naureen Aziz Qureshi⁴^,*

...agoon waters of Sonmiani bay.

...

Evaluation of Heavy Metal and Aluminium Accumulation in a Gastropod, Patella caerulea L., 1758 in Iskenderun Bay, Turkey

Önder Duysak*andKübra Azdural

Effect of Different Dietary Oils on Growth, Feed Conversion and Body Composition of Juvenile Black Fin Sea Bream, Acanthopagrus berda (Forsskal, 1775)

Abdur Rahim¹, Ghulam Abbas^1,*, Muhammad Naeem², Sara Ferrando³, Lorenzo Gallus³, Muhammad Hafeez-ur-Rehman⁴, Abdul Ghaffar⁵ and Abdul Mateen⁶

...rom Sonari Channel, Hawksbay, Karachi and were brought to aquaculture laboratory of the Centre for 15 days acclimatization. After acclimatization, they were randomly distributed into the rectangular tanks (3 × 1.5 ×1.5 ft each). In each tank, 10 fish were stocked with three replications for each treatment. Four isonitrogenous diets containing different oils i.e., fish oil (FO), soybean oil (SO), olive oil (OO) and palm oil (PO) were given to...

Phylogeographic Patterns of Microtus fortis (Arvicolinae: Rodentia) in China Based on Mitochondrial DNA Sequences

Jun Gao^1,2, Liang-Liang Yue³, Xianhuan Jiang¹, Liju Ni⁴, Muhammad Aqeel Ashraf⁵, Yuxun Zhou,¹ Kai Li^1,* and Junhua Xiao^1,*

Antibiotic Resistance Profiles of the Bacteria Isolated from some Finfish Species in Iskenderun Bay, (Northeastern Mediterranean Sea), Turkey

Yasemin Bircan Yildirim* and Hediye Tugce Vurmay

Some Reproductive Characteristics of Metapenaeus affinis (H. Milne Edwards, 1837) in Izmir Bay (Eastern Aegean Sea, Turkey)

Gülnur Metin* and İlker Aydin

The Role of Cyanobacteria in Availability of Major Plant Nutrients and Soil Organic Matter to Rice Crop under Saline Soil Condition

Zakirullah Jan¹, Shamsher Ali^1*, Tariq Sultan², Wasiullah¹ and Wiqar Ahmad¹

...oria princeps), Leptolyngbaya-MMF-2 (Lyngbya mucicola), Leptolyngbaya- MMF-3 (Lyngbya Phormidium), Gloeobacter-MMF-4 (Gloeocapsa) and Microcoleus-MMF-5 (Cryophilus) were applied randomly to flooded rice in pots. Rice seedlings were transplanted to each pot on July 18, 2016. The data were recorded on agronomic parameters of rice crop, plant tissue and post-harvest soil analysis. But in this paper, data on availability of majo...

Habitat Preference and Behaviour of the Guiana Dolphin (Sotalia guianensis) in a Well-Preserved Estuary off Southern Brazil

Carolina A. Bonin^1,2, Eric A. Lewallen^2,3, Andre J. van Wijnen³, Marta Jussara Cremer⁴ and Paulo C. Simões-Lopes^5*

A New Diploid Number and Sex Chromosome System for the Family Hersiliidae from the Mediterranean Region of Turkey

Ümit Kumbıçak, Zübeyde Kumbıçak* and Gülnare Huseynli

...meiosis of Hersiliola bayrami were determined based on Giemsa-stained testicular chromosomes for the first time. Results of spermatogonial metaphases showed that the chromosome number and the karyotype formula of the species was 2n♂=35 (X₁X₂X₃0) which is the first record for the family Hersiliidae. Both autosomes and sex chromosomes were acrocentric. The lengths of the chromosomes indicated no significant differenc...

Comparative Efficacy of Five Commercial Synthetic Acaricides against Varroa destructor (Anderson and Trueman) in Apis mellifera L. Colonies

Muhammad Abu Bakar¹, Muhammad Anjum Aqueel¹, Abu Bakar Muhammad Raza¹, Muhammad Arshad¹, Rashid Mahmood^2,* and Ziyad Abdul Qadir²

Impact of Different Strains of Cyanobacteria on Rice Crop Growth and Nutrients Uptake under Saline Soil Condition

Zakirullah Jan¹, Shamsher Ali^1*, Tariq Sultan², Muhammad Jamal Khan¹, Zahir Shah¹ and Farmanullah Khan¹

...oria princeps), Leptolyngbaya-MMF-2 (Lyngbya mucicola), Leptolyngbaya-MMF-3 (Lyngbya Phormidium), Gloeobacter-MMF-4 (Gloeocapsa) and Microcoleus-MMF-5 (Cryophilus) were applied randomly to flooded rice in pots. Five seedlings of rice (Kianat cv.) were transplanted to each pot on 18th of July 2016. The growth of rice crop was maintained for about 3 months and 12 days and shoots harvested on October 30, 2016. The data were rec...

Characterization of Complete Mitochondrial Genome and Phylogeny of Sepia lycidas (Sepioidea, Sepiidae)

Baoying Guo*¹, Yu Chen¹, Chuan Zhang², Zhenming Lv¹, Kaida Xu³, Hongling Ping⁴ and Huilai Shi⁴

The Gastrointestinal Parasites and Bacteria Community of Sable (Mates zibellina) in Northeastern China

Danyu Zhang¹, Ying Liu¹, Qinxin Shi¹, Zhiwei Peng¹, Yan Hua¹ and Zhijun Hou^1,2,*

Trade Potential Evaluation of Indigenous and Exotic Mango Genotypes Through Physico-chemical and Sensory Attributes

Irfan Ali Sabir¹, Saeed Ahmad^1*, Muhammad Nafees², Ahmad Sattar Khan¹, Maryam³ and Ishtiaq Ahmad²

... was lowest in ‘Lambay Alfansu’ and ‘Momi-K’. However, reducing sugars (RS) (4.83%), non-reducing sugars (NRS) (16.38%) and total sugars (TS) (21.21%) were significantly high in ‘Surkha Burma’. Ascorbic acid contents (AA) were high in ‘Momi-K’, whereas, total antioxidants (0.68 mM Trolox g-1), total carotenoids (TC) (52.0 µg 100-1) and flavonoids (1.79 µg 100-1) were significantly high in ‘Faisa...

Complete Mitochondrial Genome of Three Species (Perciformes, Amblyopinae): Genome Description and Phylogenetic Relationships

Zisha Liu¹, Na Song¹, Takashi Yanagimoto², Zhiqiang Han³, Bonian Shui³ and Tianxiang Gao^3,*

Fitting Nonlinear Growth Models on Weight in Mengali Sheep through Bayesian Inference

Farhat Iqbal¹, Mohammad Masood Tariq^2,*, Ecevit Eyduran³, Zil-e-Huma⁴, Abdul Waheed⁵, Farhat Abbas², Muhammad Ali², Nadeem Rashid², Majed Rafeeq², Asadullah² and Zahid Mustafa²

Nonlinear Growth Functions for Body Weight of Thalli Sheep using Bayesian Inference

Farhat Iqbal¹, Abdul Waheed^2,*, Zil-e-Huma³ and Asim Faraz²

The Validation of Different Growth Models of Randall’s Threadfin Bream, Nemipterus randalli (Russell, 1986), in Northeastern Mediterranean Sea

Sevil Demirci*, Aydın Demirci and Emrah Şimşek

The Yangtze Diluting Water and the Ocean Current System Caused an Obviously Genetic Divergence of Meretrix meretrix in China

Yunfang Tian, Zeqin Fu, Jiantong Feng, Yahong Guo, Yingying Ye*, Jiji Li and Baoying Guo

Molecular Phylogenetics of Saw-scaled Viper (Echis carinatus) from Pakistan

Muhammad Rizwan Ashraf¹, Asif Nadeem^1,2, Eric Nelson Smith³, Maryam Javed¹, Utpal Smart³, Tahir Yaqub⁴, Abu Saeed Hashmi¹ and Panupong Thammachoti³

Samreen Fatima1*, Mudassir Uddin1

COMPARISON OF ASYMMETRIC GARCH MODELS WITH ARTIFICIAL NEURAL NETWORK FOR STOCK MARKETS PREDICTION, A CASE STUDY

...xchange (KSE-100) and Bombay
Stock Exchange (BSNSE) of India are selected as case study. They are not only the member of SAARC but also sharing
the common border, due to this they are also involving in bilateral trading. We used closing indices of daily share
price for the period of 1st January, 2010 to 15th January 2016. This study compares the forecasting performance
and also investigates more volatile stock markets using Asymmetr...

Muhammad Naeem*, Sohail Asghar**

A REVIEW OF FEATURE SELECTION TECHNIQUES IN STRUCTURE LEARNING

Inam Ullah^1,2, WU Qing-Ming¹*, Ruqia Bibi² and Najam Un Nisa²

Comparison of Nesting Site Preferences and Breeding Ecology of Red-Vented Bulbul, Baya Weaver, and Grey Bush Chat in Sheikh Badin National Park Dera Ismail Khan, Pakistan

...bul. Maximum Nest n=8 of baya weaver bird observed. Grey Bush Chat successfully hatched 100%. The average incubation days for Red-vented Bulbul l12.83 ± 1.16, Baya weaver 12.71 ± 0.75, and Grey bush chat 13.25 ± 1.5 were recorded.

...

Remote Sensing Assessment of Marine Primary Productivity and Fishery Resources in the Daya Bay, China

Jing Yu¹*, Jiangmei Mao^1,2 and Dongliang Wang^1,3

...of PP was obvious in the bay, the average PP reached the highest in summer (1595.60 mg C·m^-2·d^-1) and the second in autumn (1274.67 mg C·m^-2·d^-1). The space distribution of PP decreased gradually from nearshore (greater than 1000 mg C·m^-2·d^-1) to offshore and outside (800~1000 mg C·m^-2·d^-1) of the

The Complete Mitochondrial Genome of Rhacophorus dennysi (Anura: Rhacophoridae) with Novel Gene Arrangements and its Phylogenetic Implications

Yongmin Li^1,2, Huabin Zhang¹, Xiaoyou Wu¹, Dongwei Li², Peng Yan¹ and Xiaobing Wu¹*

Pink Lobster, Palinurus mauritanicus (Gruvel, 1911), from the Mauritanian Coast: Elements of Biology and Exploitation

Dia Mamadou^1,2*, Meissa Beyah¹, Sow Amadou Harouna¹, Ba Samba Alassane¹, Bouzouma Moustapha¹, Braham Cheikh Baye¹ and Beibou Ely¹

Epidemiological and Clinical Features of Fasciola hepatica Infection in Yaks (Bos grunniens) on Tibetan Plateau, China

Hailong Dong¹, Fubin Gan², Khalid Mehmood³, Jiang-Yong Zeng⁴, Rao Zahid Abbas⁵, Mushtaq Ahmad Gondal⁶, Zhenyu Chang¹ and Qingxia Wu¹*

Mass Production of Panax ginseng C.A. Mey. Root Cultures in Indonesia

Stefan Pratama Chandra¹, Yoanes Maria Vianney¹, Theresia Liliani Christie², Merlyn Wongso², Melisa Widjaja², Deok-Chun Yang³, Se Chan Kang⁴, Manar Fayiz Mousa Atoum^5,6 and Johan Sukweenadhi¹*

...djoe), University of Surabaya (Ubaya), and Hanbang-Bio Laboratory (holding company of Kyung Hee University) established the Kalbe Ubaya Hanbang-Bio Laboratory (KUH Lab), a collaboration initiated to achieve the independence of raw materials. This laboratory is devoted to developing the plant tissue culture protocol for the mass production of P. ginseng root cultures. This paper is t...

Forecasting Rapeseed and Mustard Production In Pakistan: A Time Series Approach

Zahid Iqbal*, Farhat Ullah Khan and Jalal-ud-Din

Seroprevalence of Contagious Caprine Pleuropneumonia (CCPP) in Rupandehi and Palpa Districts of Nepal

Basanta Kumar Adhikari¹*, Deepak Subedi¹*, Sumit Jyoti¹, Krishna Kaphle², Chet Narayan Kharel³, Doj Raj Khanal⁴

... keeping this disease at bay.

...

Using of Autoregressive Integrated Moving Average (ARIMA) Model for Forecasting Milk Production of Dairy Cattle Farms in Dakahlia Governarate of Egypt

Asmaa A. Badr, Eman A. Abo Elfadl, Mohammed M. Fouda, Sayed M. Elsayed

Comparing Forecasts of GARCH (1, 1)-M and GARCH (1, 1)-M-ANNs Model: A Study Based On Stock Market Data

Samreen Fatima* and Muddasir-Uddin

Population Structure and Length-Weight Relationships of Anadara granosa and Meretrix lamarckii from the Bay of Bengal

Muhammad Rabiul Hasan¹, Zannatul Mawa¹, Muhammad Ashekur Rahman¹, Selina Yeasmin², Yahia Mahmud² and Muhammad Yeamin Hossain¹*

Diversity, Abundance and Seasonal Assessment of Wild Birds in Urban Habitat of District Chiniot, Pakistan

Ahmad Zaman, Azhar Rafique*, Farhat Jabeen and Tayyaba Sultana

...myna, The white wagtail, baya weaver, laughing dove, Rofous tail lark and Greater coucal were very common, 23 species were common, 27 species were fairly common, 15 species were uncommon, 5 species were rare while black francolin was single infrequent species. A total of 268013 individual birds were observed from seven selected sampling sites. There was a highly significant difference (P<0.01) in the diversity and abundance of open field area and built-up a...

Temporal Variation of Biometric Indices for Megalaspis cordyla (Linnaeus, 1758) from the Bay of Bengal, Bangladesh

Most. Shakila Sarmin^1,2, Md. Ashekur Rahman^1,2, Most. Farida Parvin^2,3, Mst. Shefaly Khatun⁴, Kazi Ahsan Habib⁵, Wasim Sabbir⁶, Jun Ohtomi⁷ and Md. Yeamin Hossain¹*

Phylogenetic relationship of Pakistani entomopathogenic nematode strains on the basis of ITS-1, 5.8S and ITS-2, D2-D3/28S (LSU) rDNA region and 12S rDNA mitochondrial gene

F. Shahina† and G. Mehreen

Stock Evaluation of the Data-Limited Fisheries: A Case Study of Five Major Commercially Important Fishes from the Western Indian Ocean, Pakistan

Hasnain Raza^1,2, Qun Liu¹*, Muhammad Tariq Hanif² and Yanan Han¹

Seasonal Variation in Aquatic Biota in Relation to Physico-Chemical Parameters of Sonmiani, Balochistan, Pakistan

Nasratullah Baloch¹*, Naeem Tariq Narejo², Hamida Narejo³, Muhammad Farooq Hassan⁴, Muhammad Hanif Chandio⁵, Faheem Saddar⁶, Dharti Shahnawaz Thebo⁷, Ghulam Abbas⁸ and Shahnaz Rashid⁸

...nktons, the 50 liters of bay water was strained and residue fixed with 5% formalin in sampling bottles. The 99 genera of both the planktons were recorded, which included 52 zoo- and 47 for phytoplankton from the experimental area. Among the zooplankton, Copepods were found to be rich 65% followed by Brachyuran zoa 15% while in case of phytoplankton genus Coscinodiscus were noted to be rich 60% followed by Rhizosolenia 15% during the whole duration of investiga...

Intraspecific Population Variability in Goldstripe Ponyfish, Karalla daura Sampled along the Pakistan Coast Based on Geo-Morphometric Approach

Imtiaz Kashani and Sher Khan Panhwar*

Protective Effect of Laurus nobilis Extract against Hypercholesterolemia Damage in Male Rats

Amr N. El-Shahat¹*, A.M. Abdul Azeem¹ and Mohamed H.M. Abd el Megid²

...ate the effectiveness of bay leaf extract (BLE) in protection against high cholesterol diet (HCD) induced hypercholesterolemia. About thirteen compounds of essential oils were identified by GC/MS analysis including 1.8-cineole, Linalool and sabinene which represent the main volatile oils of bay leaf. Supplementation of BLE with HCD for 10 weeks resulted in reduction in the levels of some lipid contents (total cholesterol, tr...

Seasonal Variation in the Trophic Structure of the Fish Community in Dongshan Bay and Adjacent Waters

Ying Guan^1,2, Puqing Song², Xing Miao², Hai Li², Rui Wang², Liangming Wang³, Yuan Li²* and Longshan Lin²*

Hematological Profile and Leukocyte Differentiation of Madura Cattle and their Crosses at Different Sexes and Ages

Desi Kurniati Agustina1,3, Suyadi Suyadi2*, Veronica Margaretha Ani Nugiartiningsih2, Kuswati Kuswati2

...irlangga University, Surabaya, Indonesia. A statistical analysis was conducted using analysis of variance using Proc Mixed with general linear model (GLM) using SAS studio for academics Online Edition. This study showed the Haematological profile and leucocyte differentiation of male and female Madura cattle of different ages were generally similar to their crossbred Limura cattle and within the normal range. In conclusion, Madura cattle tend to be more adapti...

Temporal Changes in Genetic Diversity of Fenneropenaeus chinensis Populations from Jinzhou Bay: Implications for Management

Qi Liu^1,2, Weiyuan Li^2,3, Qi Zhang^2,3, Ziwei Wang^2,3, Rui Gao^1,2, Wenlei Liu^1,2, Lei Zhang^1,2, Ying Liu^1,2, Tao Tian^2,3 and Hongwei Yan^2,3*

...mp productivity. Jinzhou bay is the major natural habitat and we used this location to temporally monitor the genetic effects of release of hatchery stocks on local F. chinensis populations across five years. A set of 13 microsatellite markers were used to evaluate genetic patterns across 2015, 2016 and 2019. We observed a significant Hardy-Weinberg disequilibrium across all stocks. The inbreeding coefficient (Fis) was positive (0.121–0.131) for all stoc...

Assessment of Fish Biodiversity in Sonmiani Bay, Balochistan, Pakistan (North Arabian Sea)

Nasratullah Baloch¹, Naeem Tariq Narejo², Hamida Narejo³, Muhammad Farooq Hassan⁴, Ghulam Abbas⁵, Shahnaz Rashid⁵, Muhammad Hanif Chandio⁶, Faheem Saddar⁷ and Majida Parveen Narejo⁸

Estimation of Peak Spawning Season, Length at Maturity (Lm) and Sex Ratio of Silver Pomfret (Pampus argenteus) in the Bay of Bengal, Bangladesh

Md. Abdullah Al-Mamun^1,2, Al-Mamun^2,3, Sanjay Kumar Mohanta^2,3, Md. Farhan Tazim^2,3, Mohammed Rashed Parvej^2,3, Md. Sharif Uddin^2,3, Suman Barua^1,2 and Liu Qun¹*

Growth and Conditions Appraisal of Atropus atropos (Carangidae) in the Bay of Bengal

Nur-E-Farjana Ilah¹, Md. Joynal Abedin², Esmout Jahan Alice¹, Taiba Akter Laboni¹, Mst. Shahinur Khatun¹, Most. Shakila Sarmin¹, Md. Ashekur Rahman¹, Obaidur Rahman¹, Md. Akhtarul Islam¹, Muhammad Ali Fardoush Siddquy³ and Md. Yeamin Hossain¹*

Microbiological and Physico-Chemical Characteristics of Camel Milk from Southwestern Algeria

Nafissa Sahel¹*, Fadela Chougrani², Abderrahim Cheriguene³ and Zineb Hamani¹

Bayang Ducks Supplemented with Probiotic Bacillus subtilis FNCC 0059: its Effects on the Physicochemical Characteristics of Meat

Rizki Dwi Setiawan1, Zurmiati2, Wizna2, Ridho Kurniawan Rusli2, Ade Trisna3, Surya Aulia4

...ater-holding capacity of bayang duck meat.

...

Performance Enhancement in Male Bayang Ducks after Oral Administration of the Probiotic Bacillus subtilis FNCC 0059

Zurmiati1*, Ade Trisna2, Ridho Kurniawan Rusli1, Yelsi Listiana Dewi3, Ulvi Fitri Handayani4, Wizna1

Exposing Proximate Components of Some Selected Fishes Available in Coast of the Bay of Bengal

Skeikh Mustafizur Rahman¹*, Mst. Shirin Sharmin Khan¹, Yousef Ahmed Alkhamis^2,3, Roshmon Thomas Mathew², Md. Moshiur Rahman¹, Mohammed Monirul Islam⁴, Md. Asadujjaman⁵ and Md. Golam Sarower¹

Structural Analysis and Phylogenetic Relationships of a Teleost Fish, Pethia stoliczkana Based on the Complete Mitochondrial Genome Sequence

Zhenglei Qiao*, Jie Xing and Fang Li

Insight into the Phylogenetic Position of Capreolus capreolus, the European Roe Deer, (Mammalia: Cervidae) from Turkey using Mitochondrial Genes

Perinçek Seçkinozan Seker

Seasonal variations of invertebrates diversity & environmental health in intertidal area at Tak Bay, (Kalatoo) Hingol National Park Balochistan Pakistan

ATEEQUE RAHMAN KHOOHARO* & PIRZADA JAMALUDDIN A. SIDDIQUI

Biologia (Lahore)

Featuring

Quantification of Sodium from Food Sources by Using Various Analytical Techniques

Nauman Jamil Khan, Rabia Tariq, Hina Saleem and Muhammad Waheed Mushtaq

Biologia (Lahore), Vol.69, Iss. 2, Pages 66-75
Studies on the Occurrence of Prostate Cancer in Gujrat, Punjab, Pakistan and its Association with Testosterone Level

Kanwal Nisa, Sadia Roshan, Shazia Shamas, Raheela Atta Mustafa, Shamaila Irum, Kalsoom Sughra and Memoona Iqbal

Biologia (Lahore), Vol.69, Iss. 2, Pages 54-60
Prevalence of Gastro-Intestinal Parasites in Pigeons of District Jhang-Pakistan

Muhammad Fiaz Qamar, Tahir Hussain, Iram Liaqat, Madiha Kiran, Abdur Rahman Ansari, Faiza Yasmeen and Tahira Batool

Biologia (Lahore), Vol.69, Iss. 2, Pages 48-53
Phytochemical Screening and In Vitro Antioxidant Activity of Extracts of Ipomoea purpurea Leaves from Iran

Fatemeh Beheshti, Maliheh Safavi, Mohammad Reza Akbari Eidgahi, Parviz Kokhaei, Mehdi Vazirian and Ali Akbar Shabani

Biologia (Lahore), Vol.69, Iss. 2, Pages 32-39